Seedling diseases of soybeans occur as a complex caused by multiple soilborne pathogens, including Pythium, Phytophthora, Rhizoctonia and Fusarium, that attack seeds and young seedlings during the earliest growth stages. Collectively, these diseases reduce stand establishment, slow early-season soybean growth and can permanently limit yield potential long before plants reach full canopy. The pathogens survive in the soil for many years, infect under stress-prone conditions such as cool, wet soils or compaction, and often co-occur, making it difficult to diagnose individual species without laboratory confirmation.
Pythium damping-off, caused by multiple Pythium species, is an oomycete (water mold) disease that attacks soybean seeds and seedlings, particularly under cool, wet soil conditions. This disease can lead to poor stand establishment, pre- and post-emergence damping-off and weakened seedlings that are slow to grow and vulnerable to additional stresses. The pathogen survives in soil as oospores and infects young roots shortly after planting, often spreading rapidly when soil remains saturated.
Rhizoctonia seedling blight and root rot, caused by Rhizoctonia solani, results in reddish-brown lesions on hypocotyls and roots that can girdle and kill young seedlings. This disease reduces plant vigor, delays canopy development and can lead to notable stand thinning in warm, moderately moist soils that favor pathogen activity. The fungus survives in soil and residue as overwintering structures (sclerotia) and infects seedlings soon after emergence, particularly when plants are stressed or growing slowly.
Fusarium root rot, caused by a complex of Fusarium species (F. oxysporum, F. solani, F. graminearum), affects soybean seedlings by attacking roots and lower stems early in the season. These pathogens can cause subtle reductions in vigor, discoloration of roots and chronic stand loss, ultimately reducing yield potential before plants reach the V2 stage. Fusarium spp. persist in soil and residue and infect seedlings under a wide range of conditions, often becoming more severe when plants are stressed by cold soils or compaction.
Collectively in 2025, seedling disease resulted in substantial yield impacts due to consistent moisture and plant stress early in the growing season. This led to reduced stands and poor root development which limited yield potential later in the season.